{"id":48973,"date":"2026-07-13T15:56:38","date_gmt":"2026-07-13T15:56:38","guid":{"rendered":"https:\/\/www.monmouth.edu\/career-development\/job\/ai-systems-integration-engineer\/"},"modified":"2026-07-31T08:20:35","modified_gmt":"2026-07-31T12:20:35","slug":"ai-systems-integration-engineer","status":"publish","type":"ch_job","link":"https:\/\/www.monmouth.edu\/career-development\/job\/ai-systems-integration-engineer\/","title":{"rendered":"AI Systems Integration Engineer"},"content":{"rendered":"<p><strong>BioArk Genome Engineering Operating System (BioArk GEOS)\u00a0<\/strong><\/p>\n<p>\u00a0<\/p>\n<p>Project Vision\u00a0<\/p>\n<p>\u2022\u00a0Current CRISPR software mainly focuses on guide RNA design or individual bioinformatics\u00a0<\/p>\n<p>tasks, while successful genome engineering requires engineering strategy selection, feasibility\u00a0<\/p>\n<p>analysis, laboratory planning, sequencing validation, quality control, and continuous\u00a0<\/p>\n<p>optimization.\u00a0<\/p>\n<p>\u2022\u00a0The BioArk AI CRISPR Engineering Platform is an AI Engineering System implementing a\u00a0<\/p>\n<p>Design\u2013Build\u2013Test\u2013Learn (DBTL) workflow.\u00a0<\/p>\n<p>\u2022\u00a0Bioinformatics is treated as one component of a larger engineering ecosystem.\u00a0<\/p>\n<p>\u2022\u00a0The platform leverages biomedical AI systems (e.g. Biomni) for biological reasoning while\u00a0<\/p>\n<p>BioArk develops proprietary engineering intelligence, laboratory planning, sequencing\u00a0<\/p>\n<p>interpretation and continuous learning.<\/p>\n<p>\u00a0<\/p>\n<p>AI Systems Integration &amp; Loop Orchestration Engineers<\/p>\n<ul>\n<li>\n<strong>Role Summary<\/strong>: You will serve as the core orchestrator of the BioArk Genome Engineering Operating System, responsible for bridging all individual agent layers into a unified, continuous Design-Build-Test-Learn (DBTL) loop. Your focus is strictly on system-wide state management, inter-agent communication, and automated workflow orchestration.<\/li>\n<li>\n<strong>Key Responsibilities<\/strong>:<\/p>\n<ul>\n<li>Design and deploy multi-agent orchestration frameworks (utilizing tools like LangGraph, CrewAI, or AutoGen) to manage the state and transition logic between Layer 1 through Layer 8.<\/li>\n<li>Implement robust &#8220;Human-in-the-Loop&#8221; (HITL) and &#8220;Agent-in-the-Loop&#8221; checkpoints, ensuring that critical outputs (e.g., Layer 3 strategy decisions or Layer 4 feasibility flags) can be paused for manual review before proceeding to laboratory execution.<\/li>\n<li>Develop standardized API contracts, JSON schemas, and data pipelines to guarantee seamless, loss-less handoffs of biological metadata between bioinformatics agents, laboratory planning agents, and continuous learning databases.<\/li>\n<li>Architect automated feedback loops so that failure diagnoses from Layer 6 (Test) immediately trigger re-evaluations in Layer 3 (Design) and Layer 4 (Build), fueling the continuous learning cycle.<\/li>\n<li>Implement system-wide observability, error-handling routines, and fallback mechanisms to ensure the platform remains stable if a specific sub-agent fails or hallucinates.<\/li>\n<\/ul>\n<\/li>\n<li>\n<strong>Deliverables<\/strong>:<\/p>\n<ul>\n<li>A fully functional, end-to-end DBTL orchestration pipeline integrating all 8 layers.<\/li>\n<li>Standardized inter-agent communication protocols and state-management infrastructure.<\/li>\n<li>System-wide observability and agent telemetry dashboards for tracking workflow progress.<\/li>\n<\/ul>\n<\/li>\n<li>\n<strong>Required Skills<\/strong>: Advanced multi-agent orchestration (LangGraph, AutoGen, etc.), enterprise system architecture, complex state management, API design, and backend engineering (Python\/Go).<\/li>\n<li>\n<strong>Target Core Agents &amp; Tools<\/strong>: LangGraph, CrewAI, Model Context Protocol (MCP), event-driven architectures (Kafka\/Event Grid), and system observability tools (Prometheus\/Splunk).<\/li>\n<\/ul>\n<p>\u00a0<\/p>\n","protected":false},"featured_media":0,"template":"","meta":{"_ch_employer_id":"46075","_ch_external_id":"11201636","_ch_location_state":"","_ch_location_city":"","_ch_is_ocr_job":"","_ch_expiration_date":"2026-08-13","_ch_apply_link":"https:\/\/monmouth.joinhandshake.com\/jobs\/11201636\/share_preview"},"ch_stakeholder":[],"ch_class_year":[],"ch_job_category":[89],"ch_career_skill":[],"ch_industry":[52],"class_list":["post-48973","ch_job","type-ch_job","status-publish","hentry","ch_job_category-internships","ch_industry-business-finance-real-estate"],"_links":{"self":[{"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/ch_job\/48973","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/ch_job"}],"about":[{"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/types\/ch_job"}],"wp:attachment":[{"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/media?parent=48973"}],"wp:term":[{"taxonomy":"ch_stakeholder","embeddable":true,"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/ch_stakeholder?post=48973"},{"taxonomy":"ch_class_year","embeddable":true,"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/ch_class_year?post=48973"},{"taxonomy":"ch_job_category","embeddable":true,"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/ch_job_category?post=48973"},{"taxonomy":"ch_career_skill","embeddable":true,"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/ch_career_skill?post=48973"},{"taxonomy":"ch_industry","embeddable":true,"href":"https:\/\/www.monmouth.edu\/career-development\/wp-json\/wp\/v2\/ch_industry?post=48973"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}